- Predicted Gene MLOC_54979
MLOC_54979 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_54979_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_54979_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 18.4572 | 17.7541 | 18.3156 | 15.2359 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 14.2905 | 12.2316 | 12.7261 | 9.55593 |
INF1 | Young developing inflorescences (5mm) | 14.5227 | 15.2844 | 15.3318 | 10.8097 |
INF2 | Developing inflorescences (1-1.5 cm) | 14.9562 | 13.5683 | 14.7821 | 13.6756 |
ROO | Roots from the seedlings (10 cm shoot stage) | 17.5538 | 17.6823 | 18.0959 | 17.0678 |
NOD | Developing tillers at six leaf stage, 3rd internode | 13.9968 | 12.7004 | 13.1115 | 35.773 |
CAR5 | Developing grain, bracts removed (5 DPA) | 15.7679 | 17.114 | 17.5507 | 13.6871 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.28563 | 5.48861 | 5.46207 | 11.6395 |
CDS Structure of MLOC_54979
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54979.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g49960.1 |
-2 |
0.0 |
745 |
365/415 (88%) |
13104.m05109 protein glycosyl transferase, group 1 domain containing protein, expressed |
TAIR PP10 |
AT1G78800.1 |
-2 |
0.0 |
592 |
282/392 (72%) |
UDP-Glycosyltransferase superfamily protein | chr1:29625859-29627941 REVERSE LENGTH=403 |