- Predicted Gene MLOC_54969
MLOC_54969 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_54969_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_54969_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.11862 | 1.7104 | 1.24657 | 1.59737 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.225713 | 0.244337 | 0.390475 | 0.21845 |
INF1 | Young developing inflorescences (5mm) | 0.45462 | 0.148856 | 0.154144 | 0.219983 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.71737 | 1.38934 | 1.04444 | 1.62934 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.206765 | 0.0740194 | 0.0698595 | 0.160546 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.0741489 | 0.0889845 | 0.103562 | 0.0900701 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0122675 | 0.0147187 | 0 | 0.0439661 |
CDS Structure of MLOC_54969
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54969.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g53860.1 |
+2 |
0.0 |
682 |
431/779 (55%) |
13102.m06162 protein OsSub22 - Putative Subtilisin homologue, expressed |
TAIR PP10 |
AT3G14067.1 |
+2 |
0.0 |
570 |
376/756 (50%) |
Subtilase family protein | chr3:4658421-4660754 REVERSE LENGTH=777 |