- Predicted Gene MLOC_54964
MLOC_54964 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.66881 | 9.79174 | 9.89495 | 8.44385 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.36906 | 1.43118 | 1.05777 | 2.2864 |
| INF1 | Young developing inflorescences (5mm) | 25.4827 | 17.8002 | 13.9186 | 15.378 |
| INF2 | Developing inflorescences (1-1.5 cm) | 15.8261 | 18.4466 | 16.4785 | 17.3093 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.4778 | 6.33267 | 6.53655 | 6.43691 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.95177 | 1.5301 | 1.63807 | 4.90288 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.02335 | 8.01645 | 7.99217 | 7.5122 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.12813 | 1.88957 | 2.22591 | 4.21861 |
CDS Structure of MLOC_54964
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54964.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g46650.1 |
-1 |
8e-172 |
520 |
343/721 (48%) |
13102.m05237 protein ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed |
| TAIR PP10 |
AT5G46740.1 |
-1 |
2e-91 |
308 |
206/552 (37%) |
| Symbols: UBP21 | ubiquitin-specific protease 21 | chr5:18965410-18968492 REVERSE LENGTH=732 |