MLOC_54960 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains34.626722.644228.380127.2498
LEAShoots from the seedlings (10 cm shoot stage)40.269925.484337.496426.7484
INF1Young developing inflorescences (5mm)5.405225.790935.952325.14011
INF2Developing inflorescences (1-1.5 cm)12.201812.151413.628814.0346
ROORoots from the seedlings (10 cm shoot stage)56.900441.526329.846343.5303
NODDeveloping tillers at six leaf stage, 3rd internode145.577271.151277.954622.909
CAR5Developing grain, bracts removed (5 DPA)15.036813.75914.060114.1223
CAR15Developing grain, bracts removed (15 DPA)1.545411.508941.57143.95045



CDS Structure of MLOC_54960






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK369583
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369583CUST_21815_PI427708080NoneNoneNone
MLOC_54960.4NoneAvailableAvailablecontig_39532 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----