MLOC_54956 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.70238.58397.808989.63267
LEAShoots from the seedlings (10 cm shoot stage)6.563784.000914.731254.61092
INF1Young developing inflorescences (5mm)24.12427.385727.512721.7633
INF2Developing inflorescences (1-1.5 cm)24.293826.922122.841427.1716
ROORoots from the seedlings (10 cm shoot stage)8.683649.701089.1516512.2091
NODDeveloping tillers at six leaf stage, 3rd internode3.682076.573298.3982525.0893
CAR5Developing grain, bracts removed (5 DPA)14.705214.99815.735914.5297
CAR15Developing grain, bracts removed (15 DPA)5.058124.691754.7786311.0814



CDS Structure of MLOC_54956






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK362827
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362827CUST_24580_PI427708080NoneNoneNone
MLOC_54956.1NoneAvailableAvailablecontig_39532 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----