- Predicted Gene MLOC_54943
MLOC_54943 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_54943_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_54943_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 96.535 | 88.5316 | 97.3353 | 101.081 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 80.5191 | 126.393 | 214.177 | 126.283 |
INF1 | Young developing inflorescences (5mm) | 28.3809 | 28.5905 | 28.4658 | 26.451 |
INF2 | Developing inflorescences (1-1.5 cm) | 37.3745 | 31.9114 | 45.7724 | 44.2912 |
ROO | Roots from the seedlings (10 cm shoot stage) | 326.247 | 222.753 | 232.016 | 303.449 |
NOD | Developing tillers at six leaf stage, 3rd internode | 77.067 | 55.9384 | 70.56 | 169.743 |
CAR5 | Developing grain, bracts removed (5 DPA) | 41.9491 | 43.9044 | 43.566 | 47.2657 |
CAR15 | Developing grain, bracts removed (15 DPA) | 28.0994 | 28.0954 | 26.1565 | 70.1246 |
CDS Structure of MLOC_54943
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54943.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g50130.1 |
-2 |
2e-79 |
241 |
127/148 (86%) |
13103.m05452 protein microsomal glutathione S-transferase 3, putative, expressed |
TAIR PP10 |
AT1G65820.1 |
-2 |
2e-56 |
181 |
91/145 (63%) |
microsomal glutathione s-transferase, putative | chr1:24485213-24486682 FORWARD LENGTH=146 |