MLOC_5492 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains17.172121.438220.169217.3879
LEAShoots from the seedlings (10 cm shoot stage)14.72627.883328.705158.60397
INF1Young developing inflorescences (5mm)23.983825.329724.608318.1296
INF2Developing inflorescences (1-1.5 cm)11.99712.975610.478711.9423
ROORoots from the seedlings (10 cm shoot stage)12.997119.36614.394718.7844
NODDeveloping tillers at six leaf stage, 3rd internode5.197858.66161.9352421.5397
CAR5Developing grain, bracts removed (5 DPA)16.055516.512515.210313.8338
CAR15Developing grain, bracts removed (15 DPA)3.067582.725972.894935.98499



CDS Structure of MLOC_5492






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK365532
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365532CUST_21117_PI427708080NoneNoneNone
MLOC_5492.1NoneAvailableAvailablecontig_136328 (Mapped)
MLOC_64438.6NoneAvailableNonecontig_48823 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----