MLOC_5491 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.33434.506973.874334.82331
LEAShoots from the seedlings (10 cm shoot stage)39.616557.881774.685352.1987
INF1Young developing inflorescences (5mm)9.624299.46713.301710.2485
INF2Developing inflorescences (1-1.5 cm)12.86211.645314.912515.3858
ROORoots from the seedlings (10 cm shoot stage)1.079691.284691.820661.75409
NODDeveloping tillers at six leaf stage, 3rd internode19.646835.191253.5891121.294
CAR5Developing grain, bracts removed (5 DPA)8.597487.590747.665898.54111
CAR15Developing grain, bracts removed (15 DPA)0.9594240.8200071.214862.53649



CDS Structure of MLOC_5491






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_5491.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252267.1NoneNoneNoneNone
MLOC_5491.2CUST_421_PI427708080AvailableAvailablecontig_136327 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g58790.1 +2 4e-160 462 248/318 (78%) 13102.m06814 protein cell division inhibitor, putative, expressed
TAIR PP10 AT2G21280.1 +2 7e-135 397 210/315 (67%) | Symbols: GC1, ATSULA, SULA | NAD(P)-binding Rossmann-fold superfamily protein | chr2:9110502-9112679 REVERSE LENGTH=347