MLOC_5490 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.8675 | 1.15327 | 1.59008 | 1.27586 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.677718 | 0.669435 | 0.530396 | 0.464189 |
| INF1 | Young developing inflorescences (5mm) | 2.8932 | 2.7269 | 2.93927 | 2.02831 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.23337 | 2.09193 | 1.88757 | 1.96832 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.954757 | 1.33948 | 1.50281 | 1.26105 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.308043 | 0.350542 | 1.51167 | 1.45443 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.01711 | 2.74741 | 2.81636 | 2.01225 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.802293 | 0.287831 | 0.304525 | 1.09026 |
CDS Structure of MLOC_5490
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5490.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g36540.1 |
-3 |
0.0 |
741 |
406/542 (75%) |
13101.m03700 protein pentatricopeptide, putative |
| TAIR PP10 |
AT1G64310.1 |
-3 |
4e-110 |
355 |
206/508 (41%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:23866053-23867711 FORWARD LENGTH=552 |