MLOC_54896 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains212.488169.119145.323187.448
LEAShoots from the seedlings (10 cm shoot stage)105.937129.091136.7109.517
INF1Young developing inflorescences (5mm)254.049277.846294.242263.045
INF2Developing inflorescences (1-1.5 cm)236.43223.848222.441278.078
ROORoots from the seedlings (10 cm shoot stage)196.334180.026205.045234.748
NODDeveloping tillers at six leaf stage, 3rd internode29.924936.269581.7387149.388
CAR5Developing grain, bracts removed (5 DPA)179.269214.473194.119219.274
CAR15Developing grain, bracts removed (15 DPA)148.933125.559102.153340.206



CDS Structure of MLOC_54896






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK252978.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252978.1CUST_19218_PI427708080NoneNoneNone
MLOC_54896.2NoneAvailableAvailablecontig_39482 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----