- Predicted Gene MLOC_54893
MLOC_54893 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_54893_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_54893_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 14.7677 | 7.37201 | 7.45711 | 8.80124 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.139955 | 0 | 0.194205 |
INF1 | Young developing inflorescences (5mm) | 0.0560659 | 0.0334464 | 0.0357003 | 0.0368866 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0292498 | 0 | 0 | 0.0365017 |
ROO | Roots from the seedlings (10 cm shoot stage) | 32.4082 | 16.0474 | 15.1893 | 18.3481 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0483247 | 0 | 0 | 0.00295823 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.0371812 | 0 | 0 | 0.0343028 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0262372 | 0.0934072 | 0.0376713 | 0.144735 |
CDS Structure of MLOC_54893
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54893.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g59160.1 |
-3 |
3e-175 |
500 |
243/326 (75%) |
13104.m06235 protein peroxidase precursor, putative, expressed |
TAIR PP10 |
AT1G71695.1 |
-3 |
1e-79 |
254 |
143/316 (45%) |
Peroxidase superfamily protein | chr1:26964359-26966557 FORWARD LENGTH=358 |