- Predicted Gene MLOC_54892
MLOC_54892 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 45.5457 | 34.7159 | 37.562 | 36.5643 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.0593952 | 0.0739844 | 0.30201 | 0.108073 |
INF1 | Young developing inflorescences (5mm) | 0.14514 | 0 | 0 | 0.131022 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0293047 | 0 | 0 | 0.0366304 |
ROO | Roots from the seedlings (10 cm shoot stage) | 120.932 | 65.8291 | 75.1192 | 75.1183 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.00725079 | 0 | 0.0483762 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.0369921 | 0 | 0 | 0.0341735 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.0305689 | 0 | 0.106168 |
CDS Structure of MLOC_54892
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54892.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g59150.1 |
+1 |
6e-138 |
404 |
203/313 (65%) |
13104.m06232 protein peroxidase precursor, putative, expressed |
TAIR PP10 |
AT1G71695.1 |
+1 |
2e-91 |
285 |
155/317 (49%) |
Peroxidase superfamily protein | chr1:26964359-26966557 FORWARD LENGTH=358 |