MLOC_54887 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8086560.5552641.08970.557332
LEAShoots from the seedlings (10 cm shoot stage)00.2609800.125612
INF1Young developing inflorescences (5mm)0.7072920.5618510.7035620.407557
INF2Developing inflorescences (1-1.5 cm)1.280690.6885190.7497320.80436
ROORoots from the seedlings (10 cm shoot stage)00.6184110.9795890.642658
NODDeveloping tillers at six leaf stage, 3rd internode00.0805090.07794040.305402
CAR5Developing grain, bracts removed (5 DPA)0.1421680.1283120.3179520.164581
CAR15Developing grain, bracts removed (15 DPA)1.086020.3174890.2292321.28725



CDS Structure of MLOC_54887






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_54887.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_54887.1CUST_5072_PI427708086AvailableAvailablecontig_39473 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----