MLOC_54885 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.244593.998254.727124.36497
LEAShoots from the seedlings (10 cm shoot stage)4.200410.8347921.332241.9284
INF1Young developing inflorescences (5mm)5.176117.14645.782945.65294
INF2Developing inflorescences (1-1.5 cm)5.945226.230856.49127.40687
ROORoots from the seedlings (10 cm shoot stage)5.82686.350476.36898.3109
NODDeveloping tillers at six leaf stage, 3rd internode3.519386.273637.9388323.6512
CAR5Developing grain, bracts removed (5 DPA)5.374786.142427.381126.77321
CAR15Developing grain, bracts removed (15 DPA)0.9999741.378281.427423.1295



CDS Structure of MLOC_54885






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK362499
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362499CUST_20555_PI427708080NoneNoneNone
MLOC_30914.1NoneAvailableNonecontig_213884 (Mapped)
MLOC_39308.2NoneAvailableNonecontig_2552990 (Mapped)
MLOC_54885.4NoneAvailableAvailablecontig_39472 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----