- Predicted Gene MLOC_54858
MLOC_54858 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_54858_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_54858_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 3.11232 | 2.75646 | 2.59835 | 2.80271 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.28181 | 2.04811 | 2.55052 | 1.95481 |
INF1 | Young developing inflorescences (5mm) | 1.4538 | 1.43838 | 1.75615 | 1.33215 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.53437 | 1.52679 | 1.78486 | 1.75502 |
ROO | Roots from the seedlings (10 cm shoot stage) | 9.36691 | 4.89894 | 5.80857 | 6.69257 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.14092 | 2.3681 | 2.45124 | 7.61744 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.94413 | 1.68841 | 1.98717 | 1.83282 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.596356 | 0.640684 | 0.742517 | 1.54986 |
CDS Structure of MLOC_54858
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54858.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g44110.1 |
-3 |
0.0 |
632 |
327/399 (82%) |
13104.m04390 protein hydrolase, putative, expressed |
TAIR PP10 |
AT5G54140.1 |
-3 |
2e-146 |
441 |
230/404 (57%) |
| Symbols: ILL3 | IAA-leucine-resistant (ILR1)-like 3 | chr5:21965833-21967834 FORWARD LENGTH=428 |