MLOC_54841 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.02061480.0186850.02808860.0225222
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)00.018640900.0177982
INF2Developing inflorescences (1-1.5 cm)0.0161235000.0197048
ROORoots from the seedlings (10 cm shoot stage)3.522383.533063.179394.35958
NODDeveloping tillers at six leaf stage, 3rd internode00.0025302200.0238199
CAR5Developing grain, bracts removed (5 DPA)0.01889750.0174230.02066120.0182217
CAR15Developing grain, bracts removed (15 DPA)00.020135700.0522973



CDS Structure of MLOC_54841






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_54841.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363866NoneNoneNoneNone
AK371151NoneNoneNoneNone
MLOC_54841.1CUST_3308_PI427708080AvailableAvailablecontig_39440 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g42040.1 -1 0.0 1109 554/749 (74%) 13112.m04406 protein OsWAK126 - OsWAK receptor-like protein kinase, expressed
TAIR PP10 AT1G21230.1 -1 3e-134 422 272/741 (37%) | Symbols: WAK5 | wall associated kinase 5 | chr1:7429980-7432346 FORWARD LENGTH=733