MLOC_54835 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains22.063524.252528.046321.3876
LEAShoots from the seedlings (10 cm shoot stage)58.754.174541.850834.7214
INF1Young developing inflorescences (5mm)19.225421.432427.412918.3731
INF2Developing inflorescences (1-1.5 cm)21.907816.77226.119921.4948
ROORoots from the seedlings (10 cm shoot stage)43.890851.490785.399349.4469
NODDeveloping tillers at six leaf stage, 3rd internode95.597164.7862148.234150.781
CAR5Developing grain, bracts removed (5 DPA)27.984527.066925.969424.6485
CAR15Developing grain, bracts removed (15 DPA)42.73538.583444.014995.4094



CDS Structure of MLOC_54835






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_54835.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_54835.1CUST_12775_PI427708083AvailableAvailablecontig_39434 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g49080.1 +3 3e-14 71 47/52 (90%) 13102.m05554 protein KH domain containing protein, putative, expressed
TAIR PP10None-----