- Predicted Gene MLOC_54835
MLOC_54835 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_54835_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_54835_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 22.0635 | 24.2525 | 28.0463 | 21.3876 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 58.7 | 54.1745 | 41.8508 | 34.7214 |
INF1 | Young developing inflorescences (5mm) | 19.2254 | 21.4324 | 27.4129 | 18.3731 |
INF2 | Developing inflorescences (1-1.5 cm) | 21.9078 | 16.772 | 26.1199 | 21.4948 |
ROO | Roots from the seedlings (10 cm shoot stage) | 43.8908 | 51.4907 | 85.3993 | 49.4469 |
NOD | Developing tillers at six leaf stage, 3rd internode | 95.5971 | 64.7862 | 148.234 | 150.781 |
CAR5 | Developing grain, bracts removed (5 DPA) | 27.9845 | 27.0669 | 25.9694 | 24.6485 |
CAR15 | Developing grain, bracts removed (15 DPA) | 42.735 | 38.5834 | 44.0149 | 95.4094 |
CDS Structure of MLOC_54835
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54835.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g49080.1 |
+3 |
3e-14 |
71 |
47/52 (90%) |
13102.m05554 protein KH domain containing protein, putative, expressed |
TAIR PP10 | None | - | - | - | - | - |