- Predicted Gene MLOC_54834
MLOC_54834 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 536.952 | 360.635 | 364.603 | 456.264 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 172.291 | 109.303 | 136.498 | 126.368 |
| INF1 | Young developing inflorescences (5mm) | 491.467 | 446.761 | 432.402 | 436.279 |
| INF2 | Developing inflorescences (1-1.5 cm) | 359.885 | 322.439 | 343.381 | 424.144 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 325.194 | 329.03 | 355.045 | 461.256 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 41.9321 | 45.1933 | 82.566 | 174.133 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 324.75 | 343.406 | 317.591 | 380.24 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 70.2727 | 70.9643 | 60.3932 | 182.836 |
CDS Structure of MLOC_54834
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54834.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g49030.1 |
+1 |
2e-122 |
352 |
167/178 (94%) |
13105.m05238 protein 60S ribosomal protein L18a, putative, expressed |
| TAIR PP10 |
AT2G34480.1 |
+1 |
9e-115 |
332 |
159/178 (89%) |
Ribosomal protein L18ae/LX family protein | chr2:14532916-14534161 REVERSE LENGTH=178 |