MLOC_54833 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.50118.5563511.872510.4203
LEAShoots from the seedlings (10 cm shoot stage)14.53219.075535.450217.8357
INF1Young developing inflorescences (5mm)3.106013.64555.866232.94129
INF2Developing inflorescences (1-1.5 cm)3.549744.013754.054163.73649
ROORoots from the seedlings (10 cm shoot stage)57.313424.420522.682333.6544
NODDeveloping tillers at six leaf stage, 3rd internode20.129227.510727.341981.2395
CAR5Developing grain, bracts removed (5 DPA)3.796394.252154.571893.54646
CAR15Developing grain, bracts removed (15 DPA)5.35533.811924.530369.31906



CDS Structure of MLOC_54833






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK370153
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370153CUST_13801_PI427708083NoneNoneNone
MLOC_54833.2NoneAvailableAvailablecontig_39431 (Mapped)
MLOC_72345.1NoneAvailableNonecontig_61468 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----