- Predicted Gene MLOC_54831
MLOC_54831 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 8.96699 | 11.3536 | 10.7897 | 10.5013 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 320.1 | 754.587 | 867.78 | 539.627 |
| INF1 | Young developing inflorescences (5mm) | 5.1559 | 5.07865 | 4.37987 | 4.3215 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.58319 | 2.53777 | 4.33765 | 3.69283 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.650739 | 1.8941 | 2.15196 | 2.05457 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 26.4629 | 18.6216 | 44.3877 | 72.3918 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 58.6499 | 70.5418 | 67.3122 | 65.2149 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 10.5564 | 13.4063 | 10.6959 | 28.0665 |
CDS Structure of MLOC_54831
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54831.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g08730.1 |
-3 |
2e-81 |
247 |
126/180 (70%) |
13112.m00924 protein thioredoxin, putative, expressed |
| TAIR PP10 |
AT4G03520.1 |
-3 |
6e-42 |
145 |
59/124 (48%) |
| Symbols: ATHM2 | Thioredoxin superfamily protein | chr4:1562585-1564055 REVERSE LENGTH=186 |