- Predicted Gene MLOC_54829
MLOC_54829 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_54829_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_54829_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 3.63247 | 4.78389 | 4.9057 | 4.13886 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 18.8557 | 23.9564 | 23.1855 | 17.0286 |
INF1 | Young developing inflorescences (5mm) | 6.98351 | 6.31366 | 7.92802 | 5.38542 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.89596 | 4.90895 | 6.12149 | 5.54757 |
ROO | Roots from the seedlings (10 cm shoot stage) | 10.0076 | 6.55838 | 8.89141 | 7.92087 |
NOD | Developing tillers at six leaf stage, 3rd internode | 17.8446 | 18.3523 | 14.3935 | 49.3152 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.09359 | 3.38159 | 3.7841 | 2.98991 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.167113 | 0.13858 | 0.263115 | 0.369286 |
CDS Structure of MLOC_54829
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54829.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g49040.1 |
-2 |
2e-137 |
439 |
327/461 (71%) |
13106.m05230 protein Myb-like DNA-binding domain containing protein, putative, expressed |
TAIR PP10 |
AT3G13040.2 |
-2 |
1e-56 |
207 |
168/335 (50%) |
myb-like HTH transcriptional regulator family protein | chr3:4172415-4174456 REVERSE LENGTH=449 |