MLOC_54775 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.566682.461752.470640
LEAShoots from the seedlings (10 cm shoot stage)1.86542000
INF1Young developing inflorescences (5mm)0.4527023.075961.735120
INF2Developing inflorescences (1-1.5 cm)0.9130371.3107900
ROORoots from the seedlings (10 cm shoot stage)01.428121.584780
NODDeveloping tillers at six leaf stage, 3rd internode1.582162.624451.378680
CAR5Developing grain, bracts removed (5 DPA)0.5546861.033930.537980
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_54775






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK355954
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355954CUST_19592_PI427708080NoneNoneNone
MLOC_13443.1NoneAvailableNonecontig_156566 (Mapped)
MLOC_22928.1NoneAvailableAvailablecontig_1614189 (Mapped)
MLOC_25395.1NoneAvailableNonecontig_1688849 (Mapped)
MLOC_25396.1NoneAvailableNonecontig_1688850 (Not mapped)
MLOC_29016.1NoneAvailableNonecontig_1966754 (Mapped)
MLOC_31643.1NoneAvailableNonecontig_220893 (Not mapped)
MLOC_54775.1NoneAvailableNonecontig_393912 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----