MLOC_54772 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.1370460.401880
LEAShoots from the seedlings (10 cm shoot stage)00.2542370.4401980
INF1Young developing inflorescences (5mm)0.53083700.3183680
INF2Developing inflorescences (1-1.5 cm)0.224820.729851.191880
ROORoots from the seedlings (10 cm shoot stage)01.082800
NODDeveloping tillers at six leaf stage, 3rd internode0.3413720.3847180.2230950
CAR5Developing grain, bracts removed (5 DPA)1.551811.79843.008330
CAR15Developing grain, bracts removed (15 DPA)0.6843190.4374170.6099210



CDS Structure of MLOC_54772






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK249030.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249030.1CUST_18640_PI427708080NoneNoneNone
MLOC_2451.1NoneAvailableNonecontig_121765 (Mapped)
MLOC_31322.1NoneAvailableNonecontig_217907 (Mapped)
MLOC_32233.1NoneAvailableNonecontig_226625 (Mapped)
MLOC_32784.1NoneAvailableNonecontig_2319123 (Not mapped)
MLOC_34826.1NoneAvailableAvailablecontig_244676 (Mapped)
MLOC_41216.1NoneAvailableNonecontig_2577685 (Not mapped)
MLOC_41264.1NoneAvailableNonecontig_2580100 (Mapped)
MLOC_42773.1NoneAvailableNonecontig_2662061 (Not mapped)
MLOC_48901.1NoneAvailableNonecontig_331757 (Not mapped)
MLOC_52648.1NoneAvailableNonecontig_376837 (Mapped)
MLOC_54772.1NoneAvailableNonecontig_393883 (Mapped)
MLOC_77684.1NoneAvailableNonecontig_76706 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----