MLOC_54766 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.180216.723117.762315.5234
LEAShoots from the seedlings (10 cm shoot stage)20.737615.688923.234816.3142
INF1Young developing inflorescences (5mm)18.321520.136522.841515.3239
INF2Developing inflorescences (1-1.5 cm)21.343723.84720.639422.7437
ROORoots from the seedlings (10 cm shoot stage)19.329821.946416.21323.7224
NODDeveloping tillers at six leaf stage, 3rd internode18.371721.709117.790162.2424
CAR5Developing grain, bracts removed (5 DPA)18.285516.509218.503516.0834
CAR15Developing grain, bracts removed (15 DPA)10.610410.346310.39421.4989



CDS Structure of MLOC_54766






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK355067
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355067CUST_19466_PI427708080NoneNoneNone
MLOC_27800.1NoneAvailableNonecontig_186367 (Mapped)
MLOC_50706.1NoneAvailableNonecontig_364961 (Mapped)
MLOC_54766.1NoneAvailableAvailablecontig_39379 (Not mapped)
MLOC_81964.1NoneAvailableNonecontig_99169 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----