- Predicted Gene MLOC_54764
MLOC_54764 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_54764_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_54764_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.92397 | 2.67665 | 2.49454 | 2.20091 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.00983 | 1.54785 | 1.07644 | 1.64922 |
INF1 | Young developing inflorescences (5mm) | 4.97639 | 4.36077 | 5.32808 | 4.06467 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.94764 | 6.62369 | 6.08902 | 6.75194 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.26135 | 2.8043 | 2.89377 | 3.16489 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.67175 | 2.52181 | 2.14104 | 8.029 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.55173 | 5.86631 | 5.47508 | 5.68575 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.71007 | 1.54635 | 1.81409 | 3.72159 |
CDS Structure of MLOC_54764
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54764.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g45880.1 |
-1 |
0.0 |
538 |
317/761 (42%) |
13106.m04843 protein retrotransposon protein, putative, unclassified, expressed |
TAIR PP10 |
ATMG00860.1 |
-1 |
8e-15 |
53 |
26/59 (44%) |
| Symbols: ORF158 | DNA/RNA polymerases superfamily protein | chrM:235916-236392 FORWARD LENGTH=158 |