- Predicted Gene MLOC_54759
MLOC_54759 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 12.143 | 30.3639 | 26.9108 | 25.5123 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 101.08 | 99.4954 | 59.2192 | 77.4129 |
| INF1 | Young developing inflorescences (5mm) | 55.5503 | 48.4074 | 48.2954 | 42.5172 |
| INF2 | Developing inflorescences (1-1.5 cm) | 43.7887 | 48.5549 | 43.8824 | 50.4801 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 8.65219 | 21.4326 | 13.8955 | 24.4373 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 35.1507 | 34.8857 | 39.0573 | 124.524 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 35.6016 | 29.1831 | 28.4385 | 30.2903 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.86823 | 7.26867 | 7.01414 | 16.7741 |
CDS Structure of MLOC_54759
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54759.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g53310.1 |
+3 |
0.0 |
1757 |
938/1259 (75%) |
13104.m05484 protein soluble starch synthase 3, chloroplast precursor, putative, expressed |
| TAIR PP10 |
AT1G11720.2 |
+3 |
0.0 |
1169 |
604/917 (66%) |
| Symbols: SS3 | starch synthase 3 | chr1:3951597-3956840 FORWARD LENGTH=1094 |