MLOC_54749 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.132836.018536.178986.14879
LEAShoots from the seedlings (10 cm shoot stage)15.647222.699323.064717.2943
INF1Young developing inflorescences (5mm)8.2098.577718.338686.99823
INF2Developing inflorescences (1-1.5 cm)6.748117.290116.883187.54177
ROORoots from the seedlings (10 cm shoot stage)6.382198.651146.676429.67007
NODDeveloping tillers at six leaf stage, 3rd internode5.337556.73488.6709522.1412
CAR5Developing grain, bracts removed (5 DPA)4.935334.578814.529094.44329
CAR15Developing grain, bracts removed (15 DPA)0.822390.8648710.7903171.90541



CDS Structure of MLOC_54749






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK365785
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365785CUST_21164_PI427708080NoneNoneNone
MLOC_54749.1NoneAvailableAvailablecontig_39356 (Mapped)
MLOC_59834.2NoneAvailableNonecontig_43949 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----