MLOC_54747 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.579464.451043.764826.31962
LEAShoots from the seedlings (10 cm shoot stage)3.497783.705224.275964.06074
INF1Young developing inflorescences (5mm)2.205982.3682.664852.83476
INF2Developing inflorescences (1-1.5 cm)1.753663.17632.836584.47073
ROORoots from the seedlings (10 cm shoot stage)2.662522.81953.103075.24255
NODDeveloping tillers at six leaf stage, 3rd internode7.8206815.126216.051159.0792
CAR5Developing grain, bracts removed (5 DPA)1.484021.913911.636182.61813
CAR15Developing grain, bracts removed (15 DPA)0.1155350.05405140.101950.282093



CDS Structure of MLOC_54747






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK374684
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374684CUST_22709_PI427708080NoneNoneNone
MLOC_29533.1NoneAvailableNonecontig_2014 (Not mapped)
MLOC_54747.1NoneAvailableAvailablecontig_39355 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----