- Predicted Gene MLOC_54701
MLOC_54701 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_54701_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_54701_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 104.602 | 116.673 | 115.915 | 93.318 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 91.075 | 75.4185 | 74.2165 | 58.2869 |
INF1 | Young developing inflorescences (5mm) | 78.3718 | 83.7662 | 82.1741 | 55.8833 |
INF2 | Developing inflorescences (1-1.5 cm) | 61.1657 | 68.1857 | 66.4001 | 58.5768 |
ROO | Roots from the seedlings (10 cm shoot stage) | 96.2168 | 129.404 | 110.95 | 115.93 |
NOD | Developing tillers at six leaf stage, 3rd internode | 116.348 | 106.21 | 100.824 | 276.451 |
CAR5 | Developing grain, bracts removed (5 DPA) | 109.316 | 106.991 | 117.942 | 85.9847 |
CAR15 | Developing grain, bracts removed (15 DPA) | 31.4249 | 27.2971 | 30.5682 | 55.0167 |
CDS Structure of MLOC_54701
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54701.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g07910.1 |
+1 |
0.0 |
926 |
537/561 (96%) |
13111.m00826 protein transmembrane 9 superfamily member, putative, expressed |
TAIR PP10 |
AT1G10950.1 |
+1 |
0.0 |
818 |
478/564 (85%) |
| Symbols: TMN1, AtTMN1 | transmembrane nine 1 | chr1:3659322-3663622 FORWARD LENGTH=589 |