- Predicted Gene MLOC_54696
MLOC_54696 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_54696_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_54696_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0.0241152 | 0.0393395 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.015342 | 0 | 0 | 0.0188439 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.0796134 | 0.0585247 | 0.10539 | 0.102056 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.576457 | 0.396159 | 0.366414 | 1.29842 |
CDS Structure of MLOC_54696
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54696.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g51650.1 |
+2 |
9e-34 |
139 |
120/468 (26%) |
13101.m05391 protein retrotransposon protein, putative, unclassified |
TAIR PP10 | None | - | - | - | - | - |