MLOC_54644 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.734842.07051.29941.512
LEAShoots from the seedlings (10 cm shoot stage)0.7644751.1497500.828685
INF1Young developing inflorescences (5mm)2.300112.558243.515181.86732
INF2Developing inflorescences (1-1.5 cm)2.520662.02523.76992.55488
ROORoots from the seedlings (10 cm shoot stage)1.284320.2012261.269170.660781
NODDeveloping tillers at six leaf stage, 3rd internode0.5160391.113681.583923.03759
CAR5Developing grain, bracts removed (5 DPA)2.784671.175211.225761.5421
CAR15Developing grain, bracts removed (15 DPA)1.314561.966891.110143.01181



CDS Structure of MLOC_54644






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK373536
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373536NoneNoneNoneNone
MLOC_30996.1NoneAvailableNonecontig_21478 (Not mapped)
MLOC_54644.1NoneAvailableAvailablecontig_392695 (Not mapped)
MLOC_69018.1NoneAvailableNonecontig_55760 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----