MLOC_54636 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.692257.838139.154470
LEAShoots from the seedlings (10 cm shoot stage)18.96825.691320.94920
INF1Young developing inflorescences (5mm)9.840989.764277.254790
INF2Developing inflorescences (1-1.5 cm)8.402418.320146.896620
ROORoots from the seedlings (10 cm shoot stage)2.77473.449055.205840
NODDeveloping tillers at six leaf stage, 3rd internode2.013213.111316.714050
CAR5Developing grain, bracts removed (5 DPA)6.380717.694426.037550
CAR15Developing grain, bracts removed (15 DPA)2.327442.127242.313570



CDS Structure of MLOC_54636






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK377145
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK377145CUST_23140_PI427708080NoneNoneNone
MLOC_54636.1NoneAvailableNonecontig_39267 (Mapped)
MLOC_65880.1NoneAvailableAvailablecontig_50815 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----