MLOC_54634 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.98278.447688.125178.01812
LEAShoots from the seedlings (10 cm shoot stage)13.72698.0697312.96958.76093
INF1Young developing inflorescences (5mm)7.0920612.031712.38227.17573
INF2Developing inflorescences (1-1.5 cm)6.566356.755525.73336.54948
ROORoots from the seedlings (10 cm shoot stage)16.69778.836399.4103510.4013
NODDeveloping tillers at six leaf stage, 3rd internode11.387919.823729.651859.5112
CAR5Developing grain, bracts removed (5 DPA)5.362856.240964.954.75854
CAR15Developing grain, bracts removed (15 DPA)1.994051.517521.601123.62082



CDS Structure of MLOC_54634






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_54634.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_54634.1CUST_7640_PI427708083AvailableAvailablecontig_392660 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g64920.1 +2 5e-16 74 38/42 (90%) 13101.m07004 protein nuclear matrix protein 1, putative, expressed
TAIR PP10None-----