MLOC_54621 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.020727.735117.375188.75738
LEAShoots from the seedlings (10 cm shoot stage)4.673120.3377071.265061.80035
INF1Young developing inflorescences (5mm)18.529921.6116.80519.1286
INF2Developing inflorescences (1-1.5 cm)15.818920.999215.149524.21
ROORoots from the seedlings (10 cm shoot stage)2.879334.793413.478086.24931
NODDeveloping tillers at six leaf stage, 3rd internode0.01404210.043220.02251240.140569
CAR5Developing grain, bracts removed (5 DPA)4.512625.197495.347656.38268
CAR15Developing grain, bracts removed (15 DPA)0.378560.1237450.5664340.882442



CDS Structure of MLOC_54621






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_54621.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_54621.1CUST_13236_PI427708080AvailableAvailablecontig_39254 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g38450.1 -2 0.0 613 361/514 (70%) 13109.m03825 protein expressed protein
TAIR PP10None-----