- Predicted Gene MLOC_54619
MLOC_54619 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.39408 | 7.74735 | 6.90283 | 5.54653 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.46214 | 2.78559 | 1.53437 | 3.4033 |
| INF1 | Young developing inflorescences (5mm) | 40.4773 | 43.2086 | 45.3006 | 32.4521 |
| INF2 | Developing inflorescences (1-1.5 cm) | 52.9718 | 60.7693 | 52.3751 | 56.0716 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.811741 | 4.07844 | 2.90855 | 3.8818 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.557159 | 0.440344 | 0.0893136 | 1.25658 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.87 | 14.7269 | 16.4131 | 13.6175 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.27921 | 1.5895 | 2.52902 | 4.25495 |
CDS Structure of MLOC_54619
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54619.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g38440.1 |
+3 |
0.0 |
927 |
466/717 (65%) |
13109.m03824 protein ATXR, putative, expressed |
| TAIR PP10 |
AT1G05830.2 |
+3 |
1e-39 |
161 |
119/365 (33%) |
| Symbols: ATX2 | trithorax-like protein 2 | chr1:1754452-1761225 FORWARD LENGTH=1083 |