- Predicted Gene MLOC_54615
MLOC_54615 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 35.1894 | 25.5216 | 28.9268 | 30.3327 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 11.6042 | 11.4978 | 21.7878 | 12.375 |
| INF1 | Young developing inflorescences (5mm) | 0.370316 | 0.485802 | 0.429212 | 0.388606 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.19653 | 0.216568 | 0.306406 | 0.264731 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 52.3729 | 55.1264 | 33.3467 | 59.8871 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 35.6656 | 41.9282 | 66.2575 | 126.658 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.29744 | 4.15402 | 4.67829 | 4.23744 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.98053 | 2.02066 | 2.26357 | 5.07043 |
CDS Structure of MLOC_54615
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54615.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g33920.3 |
+1 |
0.0 |
526 |
299/356 (84%) |
13110.m03007 protein transporter-related, putative, expressed |
| TAIR PP10 |
AT2G28315.1 |
+1 |
2e-130 |
389 |
220/334 (66%) |
Nucleotide/sugar transporter family protein | chr2:12088896-12090570 FORWARD LENGTH=342 |
