- Predicted Gene MLOC_54605
MLOC_54605 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_54605_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_54605_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 10.4372 | 9.78779 | 11.7316 | 9.78014 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.3863 | 7.74459 | 9.56502 | 6.14285 |
INF1 | Young developing inflorescences (5mm) | 4.08076 | 4.84493 | 4.57744 | 3.64244 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.93386 | 6.08332 | 5.43704 | 5.78177 |
ROO | Roots from the seedlings (10 cm shoot stage) | 10.2022 | 10.3252 | 8.90708 | 11.6373 |
NOD | Developing tillers at six leaf stage, 3rd internode | 6.83973 | 7.35902 | 4.70197 | 22.1921 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.57509 | 8.61531 | 9.17678 | 8.1105 |
CAR15 | Developing grain, bracts removed (15 DPA) | 8.44936 | 9.25115 | 8.10116 | 19.2104 |
CDS Structure of MLOC_54605
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54605.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g53110.1 |
-2 |
9e-146 |
451 |
239/314 (76%) |
13102.m06058 protein expressed protein |
TAIR PP10 |
AT1G68140.2 |
-2 |
1e-70 |
241 |
114/209 (55%) |
Protein of unknown function (DUF1644) | chr1:25539410-25540414 REVERSE LENGTH=308 |