- Predicted Gene MLOC_54603
MLOC_54603 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_54603_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_54603_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 4.1613 | 10.0913 | 8.44386 | 6.8457 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.14989 | 3.94243 | 3.02353 | 3.84237 |
INF1 | Young developing inflorescences (5mm) | 29.0516 | 26.2348 | 26.162 | 19.336 |
INF2 | Developing inflorescences (1-1.5 cm) | 33.2277 | 29.1194 | 29.2768 | 29.114 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.66275 | 6.478 | 4.57321 | 5.77933 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.24445 | 1.95799 | 2.30953 | 6.36224 |
CAR5 | Developing grain, bracts removed (5 DPA) | 10.0736 | 9.35642 | 9.03813 | 7.90118 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.95905 | 2.84161 | 2.41239 | 5.21343 |
CDS Structure of MLOC_54603
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54603.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g53120.1 |
+2 |
0.0 |
1223 |
675/992 (68%) |
13102.m06059 protein Peptidase family C50, putative, expressed |
TAIR PP10 |
AT4G22970.1 |
+2 |
0.0 |
680 |
501/1434 (35%) |
| Symbols: RSW4, AESP, ESP | homolog of separase | chr4:12033703-12043572 REVERSE LENGTH=2180 |