- Predicted Gene MLOC_54590
MLOC_54590 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.19309 | 1.8843 | 1.69093 | 2.53921 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.04694 | 0.474813 | 0.94505 | 0.769684 |
| INF1 | Young developing inflorescences (5mm) | 0.0578556 | 0.0647432 | 0.0835465 | 0.0646988 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0.0723273 | 0 | 0.0407933 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.6472 | 2.16832 | 0.826015 | 2.87869 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 9.88668 | 7.9257 | 0.622582 | 23.0886 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.11857 | 0.0289579 | 0.0613989 | 0.0843741 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.94958 | 4.75923 | 3.58671 | 10.5441 |
CDS Structure of MLOC_54590
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54590.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g49280.1 |
-1 |
2e-90 |
288 |
182/319 (57%) |
13101.m05123 protein zinc finger family protein, putative, expressed |
| TAIR PP10 |
AT2G01275.2 |
-1 |
7e-40 |
148 |
97/274 (35%) |
RING/FYVE/PHD zinc finger superfamily protein | chr2:142610-143809 REVERSE LENGTH=259 |