- Predicted Gene MLOC_54589
MLOC_54589 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_54589_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_54589_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 433.433 | 327.356 | 299.494 | 333.406 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 170.642 | 109.646 | 133.198 | 107.231 |
INF1 | Young developing inflorescences (5mm) | 629.079 | 588.796 | 548.023 | 506.386 |
INF2 | Developing inflorescences (1-1.5 cm) | 656.978 | 468.986 | 508.747 | 595.987 |
ROO | Roots from the seedlings (10 cm shoot stage) | 322.488 | 282.635 | 292.409 | 304.889 |
NOD | Developing tillers at six leaf stage, 3rd internode | 19.2379 | 20.2595 | 47.0216 | 69.5424 |
CAR5 | Developing grain, bracts removed (5 DPA) | 398.966 | 397.09 | 378.469 | 380.055 |
CAR15 | Developing grain, bracts removed (15 DPA) | 131.801 | 136.394 | 106.165 | 305.518 |
CDS Structure of MLOC_54589
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54589.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g49290.1 |
+2 |
0.0 |
601 |
303/333 (91%) |
13101.m05124 protein WD repeat-containing protein, putative, expressed |
TAIR PP10 |
AT3G18130.1 |
+2 |
4e-161 |
465 |
230/335 (69%) |
| Symbols: RACK1C_AT | receptor for activated C kinase 1C | chr3:6211109-6212371 REVERSE LENGTH=326 |