- Predicted Gene MLOC_54588
MLOC_54588 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.6349 | 7.4555 | 7.88764 | 6.86658 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.58737 | 3.43031 | 3.79495 | 3.61424 |
| INF1 | Young developing inflorescences (5mm) | 8.76398 | 8.40904 | 9.33371 | 7.0512 |
| INF2 | Developing inflorescences (1-1.5 cm) | 6.74163 | 7.7616 | 7.59033 | 7.70907 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.829 | 6.22035 | 7.56462 | 6.81184 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.0444 | 3.38118 | 4.13953 | 11.3297 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.57102 | 6.50795 | 5.83843 | 5.54834 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.3369 | 1.07599 | 1.20519 | 2.62114 |
CDS Structure of MLOC_54588
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54588.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g49250.1 |
+2 |
7e-110 |
357 |
168/214 (79%) |
13101.m05120 protein methyltransferase, putative, expressed |
| TAIR PP10 |
AT1G66680.1 |
+2 |
6e-119 |
380 |
209/375 (56%) |
| Symbols: AR401 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:24866352-24868888 REVERSE LENGTH=358 |