MLOC_54574 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains20.836334.630231.156236.1758
LEAShoots from the seedlings (10 cm shoot stage)28.151725.595623.399925.4737
INF1Young developing inflorescences (5mm)76.668371.716864.341866.8358
INF2Developing inflorescences (1-1.5 cm)60.82265.822959.006478.296
ROORoots from the seedlings (10 cm shoot stage)8.5577928.128820.832238.1647
NODDeveloping tillers at six leaf stage, 3rd internode2.245854.2576812.653522.9989
CAR5Developing grain, bracts removed (5 DPA)44.636843.449142.413449.8084
CAR15Developing grain, bracts removed (15 DPA)9.947410.18058.6322524.9575



CDS Structure of MLOC_54574






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK250416.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250416.1CUST_18843_PI427708080NoneNoneNone
MLOC_54574.2NoneAvailableAvailablecontig_39220 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----