MLOC_54573 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains26.056324.572921.958926.9894
LEAShoots from the seedlings (10 cm shoot stage)29.727334.1331.974831.8391
INF1Young developing inflorescences (5mm)18.789617.036715.834815.8105
INF2Developing inflorescences (1-1.5 cm)17.596119.320319.771422.4224
ROORoots from the seedlings (10 cm shoot stage)26.363332.977327.136946.5139
NODDeveloping tillers at six leaf stage, 3rd internode12.186617.258926.604479.7299
CAR5Developing grain, bracts removed (5 DPA)32.052632.518730.318634.0838
CAR15Developing grain, bracts removed (15 DPA)11.659211.780310.081927.7471



CDS Structure of MLOC_54573






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK359971
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359971CUST_13679_PI427708083NoneNoneNone
MLOC_54573.1NoneAvailableAvailablecontig_39220 (Mapped)
MLOC_70648.1NoneAvailableNonecontig_58289 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----