MLOC_54565 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8151011.555461.228061.04774
LEAShoots from the seedlings (10 cm shoot stage)1.217061.320240.6154980.790114
INF1Young developing inflorescences (5mm)1.450571.200441.172690.936395
INF2Developing inflorescences (1-1.5 cm)2.221462.930742.465832.3646
ROORoots from the seedlings (10 cm shoot stage)0.6908971.304740.5843781.11077
NODDeveloping tillers at six leaf stage, 3rd internode0.5308230.7960180.8381122.41092
CAR5Developing grain, bracts removed (5 DPA)2.372652.46272.757911.9928
CAR15Developing grain, bracts removed (15 DPA)1.533081.453461.411082.84983



CDS Structure of MLOC_54565






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_54565.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_54565.1CUST_13228_PI427708080AvailableAvailablecontig_39214 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g25840.1 -3 5e-38 150 121/330 (37%) 13104.m02439 protein OsFBX128 - F-box domain containing protein
TAIR PP10None-----