MLOC_54562 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5398870.4595670.7318260.393268
LEAShoots from the seedlings (10 cm shoot stage)0.2938210.5864810.2400110.282504
INF1Young developing inflorescences (5mm)0.317480.1592060.1990060.146159
INF2Developing inflorescences (1-1.5 cm)0.2404240.4465590.9673540.390439
ROORoots from the seedlings (10 cm shoot stage)0.2966670.4844560.5334410.417355
NODDeveloping tillers at six leaf stage, 3rd internode0.1429310.2056930.1724740.453126
CAR5Developing grain, bracts removed (5 DPA)0.1532110.2757850.3438750.167384
CAR15Developing grain, bracts removed (15 DPA)0.9727190.3321790.4775341.31041



CDS Structure of MLOC_54562






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_54562.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_54562.1CUST_5051_PI427708086AvailableAvailablecontig_39214 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----