- Predicted Gene MLOC_54560
MLOC_54560 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.71375 | 2.19178 | 2.19356 | 2.38656 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.902095 | 0.252491 | 0.705139 | 0.472871 |
| INF1 | Young developing inflorescences (5mm) | 4.37791 | 5.00272 | 5.18949 | 3.98202 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.20622 | 5.45463 | 3.71861 | 4.49891 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.03759 | 1.93225 | 1.55897 | 1.90792 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0303245 | 0.0886707 | 0.230348 | 0.320592 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.6354 | 3.21717 | 3.45976 | 2.61137 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.575803 | 0.434125 | 0.726955 | 1.28033 |
CDS Structure of MLOC_54560
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54560.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g38220.1 |
-1 |
3e-108 |
325 |
191/224 (85%) |
13107.m03945 protein expressed protein |
| TAIR PP10 |
AT5G49560.1 |
-1 |
3e-40 |
147 |
98/227 (43%) |
Putative methyltransferase family protein | chr5:20110961-20111785 REVERSE LENGTH=274 |