MLOC_54549 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.32018.462097.190679.63879
LEAShoots from the seedlings (10 cm shoot stage)6.166279.111515.99829.66563
INF1Young developing inflorescences (5mm)5.739434.716695.537215.04434
INF2Developing inflorescences (1-1.5 cm)4.707585.089954.193446.09359
ROORoots from the seedlings (10 cm shoot stage)10.02736.296837.519519.57007
NODDeveloping tillers at six leaf stage, 3rd internode6.435767.651179.6503828.1986
CAR5Developing grain, bracts removed (5 DPA)6.139386.783465.554767.30795
CAR15Developing grain, bracts removed (15 DPA)3.02082.586071.46356.86398



CDS Structure of MLOC_54549






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK367352
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367352CUST_21450_PI427708080NoneNoneNone
MLOC_54549.1NoneAvailableAvailablecontig_39204 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----