MLOC_54548 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0.05374870.1736910.1998740.110092
INF1Young developing inflorescences (5mm)00.060422700.045893
INF2Developing inflorescences (1-1.5 cm)0.04979930.07072870.09940250.0648899
ROORoots from the seedlings (10 cm shoot stage)0.123190.1044880.09979460.115934
NODDeveloping tillers at six leaf stage, 3rd internode0.4566670.3279261.190071.24547
CAR5Developing grain, bracts removed (5 DPA)3.803373.659993.965223.11476
CAR15Developing grain, bracts removed (15 DPA)1.69591.447571.516753.18003



CDS Structure of MLOC_54548






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK374664
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374664CUST_25900_PI427708080NoneNoneNone
MLOC_54548.4NoneAvailableAvailablecontig_39204 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----