- Predicted Gene MLOC_54525
MLOC_54525 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.51507 | 3.74884 | 4.17372 | 3.86926 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 17.4211 | 10.5591 | 11.5704 | 11.0331 |
| INF1 | Young developing inflorescences (5mm) | 3.74426 | 4.37235 | 4.1072 | 3.53746 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.88062 | 8.16098 | 8.75409 | 9.42476 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 8.99178 | 4.21878 | 4.37311 | 5.69467 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.32706 | 1.50339 | 1.78269 | 4.68919 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.05132 | 5.93282 | 3.578 | 5.1317 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.41 | 9.28428 | 8.07393 | 20.7557 |
CDS Structure of MLOC_54525
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54525.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g39560.1 |
+2 |
1e-140 |
429 |
214/313 (68%) |
13108.m04222 protein OTU-like cysteine protease family protein, putative, expressed |
| TAIR PP10 |
AT3G57810.1 |
+2 |
4e-78 |
259 |
125/190 (66%) |
Cysteine proteinases superfamily protein | chr3:21416336-21417809 FORWARD LENGTH=274 |