- Predicted Gene MLOC_54496
MLOC_54496 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 15.3841 | 15.1375 | 13.7028 | 16.435 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.5326 | 1.32724 | 1.85106 | 3.05774 |
| INF1 | Young developing inflorescences (5mm) | 16.4259 | 17.7263 | 19.7772 | 17.0737 |
| INF2 | Developing inflorescences (1-1.5 cm) | 27.8709 | 30.13 | 29.6756 | 36.7006 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 10.387 | 11.541 | 11.7921 | 15.379 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 7.99707 | 6.66343 | 6.04638 | 21.6506 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 8.41 | 9.47749 | 8.42248 | 10.1431 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.28235 | 2.42222 | 2.34743 | 6.4402 |
CDS Structure of MLOC_54496
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_54496.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g36020.1 |
-2 |
7e-166 |
485 |
303/412 (74%) |
13108.m03781 protein Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed |
| TAIR PP10 |
AT3G14000.2 |
-2 |
5e-108 |
335 |
221/426 (52%) |
| Symbols: ATBRXL2, BRX-LIKE2 | DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein | chr3:4631170-4633353 REVERSE LENGTH=374 |